Class FingerprintUtils.VariantContextSet
java.lang.Object
java.util.AbstractCollection<htsjdk.variant.variantcontext.VariantContext>
java.util.AbstractSet<htsjdk.variant.variantcontext.VariantContext>
java.util.TreeSet<htsjdk.variant.variantcontext.VariantContext>
picard.fingerprint.FingerprintUtils.VariantContextSet
- All Implemented Interfaces:
Serializable, Cloneable, Iterable<htsjdk.variant.variantcontext.VariantContext>, Collection<htsjdk.variant.variantcontext.VariantContext>, NavigableSet<htsjdk.variant.variantcontext.VariantContext>, SequencedCollection<htsjdk.variant.variantcontext.VariantContext>, SequencedSet<htsjdk.variant.variantcontext.VariantContext>, Set<htsjdk.variant.variantcontext.VariantContext>, SortedSet<htsjdk.variant.variantcontext.VariantContext>
- Enclosing class:
FingerprintUtils
public static class FingerprintUtils.VariantContextSet
extends TreeSet<htsjdk.variant.variantcontext.VariantContext>
A class that holds VariantContexts sorted by genomic position
- See Also:
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Method Summary
Methods inherited from class TreeSet
add, addAll, addFirst, addLast, ceiling, clear, clone, comparator, contains, descendingIterator, descendingSet, first, floor, headSet, headSet, higher, isEmpty, iterator, last, lower, pollFirst, pollLast, remove, size, spliterator, subSet, subSet, tailSet, tailSetMethods inherited from class AbstractSet
equals, hashCode, removeAllMethods inherited from class AbstractCollection
containsAll, retainAll, toArray, toArray, toStringMethods inherited from interface Collection
parallelStream, removeIf, stream, toArrayMethods inherited from interface NavigableSet
removeFirst, removeLast, reversed